[BioC] lumi package

[Steve Lianoglou]

Hi,

On Sep 30, 2009, at 11:00 AM, Weiwei Shi wrote:

> Hi there
> I got the error from installing this package? Any suggestion?
>
> Thanks,
>
> Weiwei
>
>> source("http://www.bioconductor.org/biocLite.R")
>> biocLite("lumi")
> Running biocinstall version 2.1.11 with R version 2.6.1
> Your version of R requires version 2.1 of BioConductor.
> trying URL '
> http://bioconductor.org/packages/2.1/bioc/bin/macosx/universal/contrib/2.6/lumi_1.4.0.tgz
> '
> Content type 'application/x-gzip' length 5393927 bytes (5.1 Mb)
> opened URL
> ==================================================
> downloaded 5.1 Mb
>
> Error in sprintf(gettext(fmt, domain = domain), ...) :
>  argument is missing, with no default
> tar: Skipping to next header
> tar: Archive contains obsolescent base-64 headers
>
> gzip: stdin: invalid compressed data--crc error
>
> gzip: stdin: invalid compressed data--length error
> tar: Child returned status 1
> tar: Error exit delayed from previous errors
>
>
>> sessionInfo()
> R version 2.6.1 (2007-11-26)
> i386-apple-darwin8.10.1

The first suggestion is to install the newest version of R and try  
again.

http://cran.r-project.org/bin/macosx/

Let us know if you still have a problem after that.

-steve

--
Steve Lianoglou
Graduate Student: Computational Systems Biology
   |  Memorial Sloan-Kettering Cancer Center
   |  Weill Medical College of Cornell University
Contact Info: http://cbio.mskcc.org/~lianos/contact