[BioC] Problem installing affy in Debian lenny 64 bits

[Sofia Braga]

>
> Dear all,
>
> I'm running Debian lenny 64 bits. I tried to install affy package,  
> from
> Bioconductor using the following commands:
>
>> source("http://bioconductor.org/biocLite.R")
>> biocLite('affy')
>
> I had to install some packages in the system to fulfill dependency  
> requirements,
> including the package liblapack-dev. Afetr this, I manage to compile  
> and install
> without errors. However, when I try to load the library I get the  
> following
> error:
>
>> library(affy)
> Error in dyn.load(file, DLLpath = DLLpath, ...) :
>  unable to load shared library
> '/home/mlrodrigues/R/x86_64-pc-linux-gnu-library/2.9/preprocessCore/ 
> libs/preprocessCore.so':
>  /usr/lib/atlas/liblapack.so.3gf: undefined symbol: ATL_chemv
> Error: package/namespace load failed for 'affy'
>
> Does anyone know how to workaround this problem?
>
> Many thanks,
>
>

Sofia Braga, MD
Computational Genomics Laboratory
Instituto Gulbenkian Ciencia
sbraga at igc.gulbenkian.pt