[BioC] Querying dbSNP

Marc Carlson mcarlson at fhcrc.org
Mon Oct 19 22:30:51 CEST 2009


Hi Sharon,

It's not clear to me from your email what you intend to do, but I know
that some dbSNP data is available as a UCSC track and should therefore
be obtainable by using the rtracklayer package.

  Marc


Sharon wrote:
> Dear All,
>
> Is there any tool in Bioconductor to query dbSNP? I know that (correct me,
> if I am wrong) biomaRt is primarily for Ensemble.
>
> Thanks in advance.
>
> Kind regards,
> Sharon.
>
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