[BioC] Installing hthgu133acdf_2.4.0 Was: Re: (no subject)
Saroj K Mohapatra
saroj at vt.edu
Sat May 2 18:21:11 CEST 2009
Hi,
I suspect you are having a problem with the proxy server / firewall
settings at your system.
I was able to install the package without any problem (see below).
Best wishes,
Saroj
> library("hthgu133acdf")
Error in library("hthgu133acdf") :
there is no package called 'hthgu133acdf'
>
> source("http://www.bioconductor.org/biocLite.R")
> biocLite("hthgu133acdf")
Running biocinstall version 2.4.10 with R version 2.9.0
Your version of R requires version 2.4 of Bioconductor.
trying URL
'http://bioconductor.org/packages/2.4/data/annotation/src/contrib/hth
gu133acdf_2.4.0.tar.gz'
Content type 'application/x-gzip' length 1738820 bytes (1.7 Mb)
opened URL
==================================================
downloaded 1.7 Mb
* Installing *source* package ‘hthgu133acdf’ ...
** R
** data
** preparing package for lazy loading
** help
*** installing help indices
>>> Building/Updating help pages for package 'hthgu133acdf'
Formats: text html latex example
geometry text html latex example
hthgu133acdf text html latex
hthgu133adim text html latex
** building package indices ...
* DONE (hthgu133acdf)
The downloaded packages are in
‘/tmp/RtmpH6JhO7/downloaded_packages’
Updating HTML index of packages in '.Library'
> library("hthgu133acdf")
> sessionInfo()
R version 2.9.0 (2009-04-17)
x86_64-unknown-linux-gnu
locale:
LC_CTYPE=en_US.UTF-8;LC_NUMERIC=C;LC_TIME=en_US.UTF-8;LC_COLLATE=en_US.UTF-8;LC_
MONETARY=C;LC_MESSAGES=en_US.UTF-8;LC_PAPER=en_US.UTF-8;LC_NAME=C;LC_ADDRESS=C;L
C_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
loaded via a namespace (and not attached):
[1] tools_2.9.0
顏厥全 wrote:
> Dear Sir:
>
> I encounter difficulty in downloading hthgu133acdf_2.4.0.zip through
> following R code
> source("http://bioconductor.org/biocLite.R")
> biocLite("hthgu133acdf")
>
> Could you solve this problem? Thanks
>
>
>
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