[BioC] Limma - which colors are allowable for SpotTypes?

Philipp Pagel p.pagel at wzw.tum.de
Thu Jan 22 16:16:29 CET 2009

> I'm using limma and have set a spot types colors to "indigo".
> When I then run plotMA(RG[,1]) I get the following message:
> "Error in plot.xy(xy.coords(x, y), type = type, ...) : invalid
> colour name" Can anyone advise on which colors are allowable
> for setting spot types?

I guess limma simply uses the names defines in R. Have a look at
the output of colors()


Dr. Philipp Pagel
Lehrstuhl für Genomorientierte Bioinformatik
Technische Universität München
Wissenschaftszentrum Weihenstephan
85350 Freising, Germany

More information about the Bioconductor mailing list