[BioC] Keep getting warning messages of package 'XYZ' was builtunder R version 2.8.1

[michael watson (IAH-C)]

I think the point is that if you run bioclite under R 2.8.0 it installs packages that then warn they were built under 2.8.1


-----Original Message-----
From: bioconductor-bounces at stat.math.ethz.ch on behalf of Vincent Carey
Sent: Sun 22/02/2009 10:28 AM
To: Daren Tan
Cc: bioconductor at stat.math.ethz.ch
Subject: Re: [BioC] Keep getting warning messages of package 'XYZ' was builtunder R version 2.8.1
 
This is a warning.  It is telling you that there is a mismatch between the
version of R that you are running (2.8.0,
which is not current) and 2.8.1 (the current version, that we use to build
the packages).  There is no indication
that anything is "broken", but it is not really possible to give any
assurances of the sort you seek.  To get rid
of the warning, which will only be observed at install time, you would need
to upgrade R to 2.8.1.  If you run the
examples of the package, or build the vignette, and find that the
computations you generate agree with those
of the vignette, that would be some assurance that nothing is drastically
wrong.

On Sun, Feb 22, 2009 at 1:18 AM, Daren Tan <daren76 at hotmail.com> wrote:

>
>
> I just installed another bioconductor package "seqinr". I only noticed the
> warning message today, and fear that my R or bioconductor is broken. Please
> give me some assurance it is working fine. I dread to reinstall R and
> bioconductor again.
>
> > library("seqinr")
> Warning message:
> package 'seqinr' was built under R version 2.8.1
>
> > sessionInfo()
> R version 2.8.0 (2008-10-20)
> i386-pc-mingw32
> locale:
> LC_COLLATE=English_United States.1252;LC_CTYPE=English_United
> States.1252;LC_MONETARY=English_United
> States.1252;LC_NUMERIC=C;LC_TIME=English_United States.1252
> attached base packages:
> [1] stats     graphics  grDevices utils     datasets  methods   base
> other attached packages:
> [1] seqinr_2.0-2
> loaded via a namespace (and not attached):
> [1] tools_2.8.0
>
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