[BioC] Annotation for Medicago array (Affy)
Ana Conesa
aconesa at cipf.es
Fri Feb 20 00:36:49 CET 2009
Dear Guido
The Blast2GO Functional Annotation Repository
http://blast2go.bioinfo.cipf.es/b2gfar
contains GO annotations for 17 non-model species Affymetrix
GeneChip's, including Medicago. You can use the annotation simply as
such or in combination with Blast2GO for analysis purposes
(enrichment,visualization and so on)
Cheers
Ana
>
>
>---- Mensaje Original ----
>De: Guido.Hooiveld at wur.nl
>Para: bioconductor at stat.math.ethz.ch
>Asunto: RE: [BioC] Annotation for Medicago array (Affy)
>Fecha: Thu, 19 Feb 2009 22:46:38 +0100
>
>>
>>Dear list,
>>For a coworker we hybridized several Medicago arrays (Affymetrix).
>We
>>are now at the stage of data analyses. Unfortunately, the annotation
>>info provided by Affymetrix is limited, and a 'medicago.db' is
>missing
>>at BioC. Therefore I would like to ask whether someone knows an
>>alternative source for this.
>>TIA,
>>Guido
>>
>>------------------------------------------------
>>Guido Hooiveld, PhD
>>Nutrition, Metabolism & Genomics Group
>>Division of Human Nutrition
>>Wageningen University
>>Biotechnion, Bomenweg 2
>>NL-6703 HD Wageningen
>>the Netherlands
>>tel: (+)31 317 485788
>>fax: (+)31 317 483342
>>internet: http://nutrigene.4t.com <http://nutrigene.4t.com/>
>>email: guido.hooiveld at wur.nl
>>
>>
>> [[alternative HTML version deleted]]
>>
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>ormatics.conductor
>>
-------------------------------------------
Ana Conesa, PhD
Bioinformatics Department
Centro de Investigación Príncipe Felipe
Avda. Autopista Saler 16
46013 Valencia Spain
http://bioinfo.cipf.es/aconesa
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