[BioC] print only rows where first string is present in a different file

Laura Rodriguez Murillo laura.lmurillo at gmail.com
Tue Feb 3 00:40:23 CET 2009


Hi dear list,

I'm trying to use a package to perform some analysis but I need to
process a file first of all. I have file A with 6 columns and 443816
rows and I need to select from here the rows where the string in the
first column is present in file B that has 333751 rows and only one
column. So all the strings in file B are present in the first column
of file A but the contrary is not true. I'm kind of stuck with this
matter so I would appreciate any help.

Thank you

Laura
---------------------------------
Laura Rodriguez
Columbia University
New York, NY
US



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