[BioC] At a loss on new project with Affymetrix U133 2.0

[Steve Lianoglou]

> I am starting a new project using Affymetrix U133 2.0, and hope to  
> seek suggestions on completing the analysis within 1 to 2 months.  
> The objective is to identify differentially expressed genes, and to  
> perform gene ontology analysis. Now I am at a loss given the diverse  
> packages and algorithms to choose from.

Also, for GO analysis, have a look at the GOstats package:

http://bioconductor.org/packages/2.3/bioc/html/GOstats.html

-steve

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Steve Lianoglou
Graduate Student: Physiology, Biophysics and Systems Biology
Weill Medical College of Cornell University

http://cbio.mskcc.org/~lianos