[BioC] Does old workspace work?
Loren Engrav
engrav at u.washington.edu
Tue Oct 28 06:16:46 CET 2008
> sessionInfo()
R version 2.8.0 Patched (2008-10-26 r46783)
i386-apple-darwin9.5.0
locale:
en_US.UTF-8/en_US.UTF-8/C/C/en_US.UTF-8/en_US.UTF-8
attached base packages:
[1] splines tools stats graphics grDevices utils datasets
methods base
other attached packages:
[1] simpleaffy_2.18.0 genefilter_1.22.0 survival_2.34-1 affyio_1.10.0
porcinecdf_2.3.0 gcrma_2.14.0 matchprobes_1.14.0 affy_1.20.0
Biobase_2.2.0
loaded via a namespace (and not attached):
[1] AnnotationDbi_1.4.0 DBI_0.2-4 RSQLite_0.7-1
annotate_1.20.0 preprocessCore_1.4.0
==============
A year or so ago I ran 64bit R on Mac PPC and saved various workspaces
Now am running 64bit R on Intel 2x3.2 QuadCore and MacOS 10.5.5
I load up the old workspaces
and I enter
> write.exprs(ABeset_gcrma, file="ABeset_gcrma081028orig.txt")
Where ABeset_gcrma is an old file
and I get
Error in function (classes, fdef, mtable) :
unable to find an inherited method for function "write.exprs", for signature
"exprSet"
And I enter
> exprs2excel(ABeset_gcrma, file="ABeset_gcrma081028v2.csv")
And I get
Error: could not find function "exprs2excel"
Am I doing something wrong?
Thank you
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