[BioC] about: analyze 250K sty SNP array

[Henrik Bengtsson]

For CN analysis, try aroma.affymetrix;

 http://www.braju.com/R/aroma-affymetrix/

/Henrik

On Thu, Oct 9, 2008 at 7:37 AM, Zhang, Hailei
<hailei_zhang at dfci.harvard.edu> wrote:
> Hi,
>
> I know R package of crlmm can be used to get the copy number from snp array.
> But If I have tumor and its paired normal samples, I can not use the crlmm.
> Could you tell which R packages can be used to analyze the paired samples?
> Thanks a lot.
>
>
>
> Hailei
>
>
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