[BioC] Working with Affymetrix Files

[Mark Cowley]

More information needed AA, since i've interpreted your question  
differently to all of the other replies.
Do you want to export the RMA processed data, or the raw CEL data in a  
human readable format?

mark
-----------------------------------------------------
Mark Cowley, BSc (Bioinformatics)(Hons)

Peter Wills Bioinformatics Centre
Garvan Institute of Medical Research
-----------------------------------------------------

On 24/06/2008, at 9:46 PM, A A wrote:

> Hello Everyone,
>
> I am very new to using R and Bioconductor, so please bare with me.   
> I have Affymetrix files that are in CEL format and i am trying to  
> convert them into text files so that I can work with them.  I have  
> been trying to use the command justSNPRMA, but I am not sure what to  
> do after I run the command.  I tried searching on the net to see if  
> there were step-by-step instructions for doing this, but I have not  
> been successful.  Would someone direct me to such a site or explain  
> this process to me?
>
> Thanks,
>
> AA
>
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