[BioC] nsFilter cutoff
james perkins
jperkins at biochem.ucl.ac.uk
Mon Jun 23 18:54:26 CEST 2008
Hi,
I am finding the nsFilter IQR cutoff somewhat confusing.
It says it is using IQR with a default cutoff of 0.5.
This gives the impression that if you line up the data and take the
value between the 0.25 and 0.75 quantiles, you would keep the probeset
if this value was < 0.5
However this is not the case, so I would like to know how exactly does
this work?
Regards,
James
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