[BioC] affy won't load
Kasper Daniel Hansen
khansen at stat.Berkeley.EDU
Mon Jun 16 02:42:05 CEST 2008
This should not happen out of the box. Which R did you install (CRAN R
or one from r.research.att.com or did you compile from scratch)? And
what does options("pkgType") tell you (mac.binary I guess).
On Jun 15, 2008, at 4:43 PM, jason smith wrote:
> Thanks Steve,
> I checked, and the files (affy and related) are installed on my
> computer, however when I attempt to load them into R I get the error
> mentioned previously (reminder below):
>>> Error in dyn.load(file, DLLpath = DLLpath, ...) :
>>> unable to load shared library
>>> affy.so, 6): Library not loaded:
>>> Referenced from:/Users/sjorges2002/Library/R/2.7/library/affy/libs/
>>> Reason: image not found
>>> Error in library(affy) : .First.lib failed for'affy'
> I'm not sure what is happening - all of the files are in the correct
> folders on my hard drive, but for some reason library(affy) fails.
> Will installing/enabling gettext address this?
> --- On Sat, 6/14/08, Steve Lianoglou
> <mailinglist.honeypot at gmail.com> wrote:
>> I checked to see if I had that file and I did, so I
>> wondered how the
>> heck it got there.
>> According to the tutorial below (and other hints from
>> google), it
>> seems to come from the installation of gettext, although
>> I'm not sure
>> where mine came from since I don't remember explicitly
>> installing it.
>> You can follow along with that link (up to step 2), but
>> probably your
>> standard ./configure / make / make install dance should do
>> just fine.
>> You can get gettext here:
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