[BioC] Bioconductor and R 2.7
Herve Pages
hpages at fhcrc.org
Tue Apr 29 20:41:34 CEST 2008
Herve Pages wrote:
[...]
> For BioC package, this should be done with biocLite(), which is the easy
> and
> safe way to do it. Other methods can work if you know what you are doing.
> E.g. using update.packages() might work, provided that you use the proper
> repositories for BioC 2.2. This can be achieved with:
>
> > source("http://bioconductor.org/biocLite.R")
> > biocinstallRepos()
> [1] "http://bioconductor.org/packages/2.2/bioc"
> [2] "http://bioconductor.org/packages/2.2/data/annotation"
> [3] "http://bioconductor.org/packages/2.2/data/experiment"
> [4] "http://bioconductor.org/packages/2.2/extra"
> [5] "http://cran.fhcrc.org"
> > install.packages(rep=biocinstallRepos(), ask=FALSE)
^^^^^^^
update.packages(rep=biocinstallRepos(), ask=FALSE)
oops...
H.
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