[BioC] matching transcription factor binding sites
Hans-Ulrich Klein
h.klein at uni-muenster.de
Fri Apr 11 21:41:25 CEST 2008
Dear all,
I want to locate transcription factor binding sites (tfbs) within a
given sequence. The tfbs are derived from databases like transfac or
jaspar and are described by matrices. Are there algorithms for locating
tfbs matches (e.g. "matinspector") implemented in bioconductor? I could
not find one.
Regards,
Hans-Ulrich
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