[BioC] default fdr rate in limma/affylmgui

[k. brand]

Dear List,

I'm trying to confirm the default fdr rate (for the BH method) in limma 
& also in affylmGUI. I failed to extract this information from list 
archives or the manual.

Does anyone know what it defaults to when not specified? And out of 
curiosity, where/how is this information obtained/confirmed?

thanks in advance,

Karl


-- 
*new phone numbers*

Karl Brand <k.brand at erasmusmc.nl>
Department of Genetics
Erasmus MC
Dr Molewaterplein 50
3015 GE Rotterdam
lab +31 (0)10 704 3409 fax +31 (0)10 704 4743 mob +31 (0)642 777 268