[BioC] Rgraphviz, deprecated imageMap

Robert Gentleman rgentlem at fhcrc.org
Mon Nov 26 17:32:25 CET 2007


Hi,

   FYI in R and BioC you will know if a function is deprecated or not by 
the error/warning you get when you try to use it, and typically such a 
warning will be present for about six months before the function is made 
defunct. In this case no such deprecation has happened.

imageMap is in the geneplotter package.

best wishes
   Robert


Ariel Chernomoretz wrote:
> Hi BioC's and Rgraphviz maintainers,
> 
> I have recently installed BioC 2.1 on R 2.6 and I found that the
> imageMap function is not included anymore in
> Rgraphviz 1.16.
> I found that function real handy to produce visual reports of GO
> overrepresentation analysis performed mainly with GOstats.
> (As a matter of fact I was in the process of cleaning the code in
> order to submit  a new bioc tool intended to produce
> fancy html reports)
> 
> Is there any chance to reconsider including the imageMap functionality
> again in Rgraphviz?
> Thanks
> Ariel./
> 
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-- 
Robert Gentleman, PhD
Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N, M2-B876
PO Box 19024
Seattle, Washington 98109-1024
206-667-7700
rgentlem at fhcrc.org



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