[BioC] GeneChip Mouse Gene 1.0 ST annotation

Marc Carlson mcarlson at fhcrc.org
Fri Nov 16 19:08:50 CET 2007


Marco Fabbri wrote:
> I could not find annotation for  "GeneChip(R) Mouse Gene 1.0 ST".
>
> Any suggestion?
>
> Thank you
>
> Marco
>
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>   

If you need something right this instance you still have a couple of
options.  You can either use AnnBuilder to make a classic chip based
package. 

http://bioconductor.org/packages/2.1/bioc/html/AnnBuilder.html


Or alternatively you could just try to get what you need from our
organism centric mouse package org.Mm.eg.db (this could work if you
already have entrez gene IDs for your probes).

http://bioconductor.org/packages/2.1/data/annotation/html/org.Mm.eg.db.html


    Marc



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