[BioC] Error in loading package preprocessCore

Weiwei Shi helprhelp at gmail.com
Wed Nov 14 00:29:29 CET 2007


hi, there:

recently my laptop was burned so I bot a new one; when I tried to use
affy package, I met the following problem:


> library(affy)
Loading required package: preprocessCore
Error in dyn.load(file, ...) :
  unable to load shared library
'/Library/Frameworks/R.framework/Versions/2.6/Resources/library/preprocessCore/libs/i386/preprocessCore.so':
  dlopen(/Library/Frameworks/R.framework/Versions/2.6/Resources/library/preprocessCore/libs/i386/preprocessCore.so,
5): Library not loaded: /usr/local/lib/libgfortran.2.dylib
  Referenced from:
/Library/Frameworks/R.framework/Versions/2.6/Resources/library/preprocessCore/libs/i386/preprocessCore.so
  Reason: image not found
Error: package 'preprocessCore' could not be loaded

> version
               _
platform       i386-apple-darwin8.10.1
arch           i386
os             darwin8.10.1
system         i386, darwin8.10.1
status         Patched
major          2
minor          6.0
year           2007
month          11
day            09
svn rev        43408
language       R
version.string R version 2.6.0 Patched (2007-11-09 r43408)

> sessionInfo()
R version 2.6.0 Patched (2007-11-09 r43408)
i386-apple-darwin8.10.1

locale:
en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] tools     stats     graphics  grDevices utils     datasets
methods   base

other attached packages:
[1] affyio_1.5.11  Biobase_1.16.1


-- 
Weiwei Shi, Ph.D
Research Scientist
GeneGO, Inc.

"Did you always know?"
"No, I did not. But I believed..."
---Matrix III



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