[BioC] org.Dm.egACCNUM2EG

[Herve Pages]

Hi Tiandao,


Tiandao Li wrote:
[...]
> * Installing *source* package 'RCurl' ...
> checking for curl-config... no
> Cannot find curl-config
> ERROR: configuration failed for package 'RCurl'
> ** Removing '/usr/local/lib/R/site-library/RCurl'

I think you need to install the libcurl3 Ubuntu package first (use synaptic).

> * Installing *source* package 'XML' ...
> checking for gcc... gcc
> checking for C compiler default output file name... a.out
> checking whether the C compiler works... yes
> checking whether we are cross compiling... no
> checking for suffix of executables... 
> checking for suffix of object files... o
> checking whether we are using the GNU C compiler... yes
> checking whether gcc accepts -g... yes
> checking for gcc option to accept ISO C89... none needed
> checking how to run the C preprocessor... gcc -E
> checking for sed... /bin/sed
> checking for xml2-config... no
> Cannot find xml2-config
> ERROR: configuration failed for package 'XML'
> ** Removing '/usr/local/lib/R/site-library/XML'

And for this one you need libxml2-dev (I think).

Cheers,
H.