[BioC] R memory overflow in my server
D.Enrique ESCOBAR ESPINOZA
escobarebio at yahoo.com
Fri May 18 15:57:37 CEST 2007
Hi,
I was doing QC of ~200 hgu-133a chip,
but it runs out of memory,
I used the lowest priority with nice, is there another trick to use
in linux (excluding ulimit that kill process)?
Here they are the spec of my server (2 processors)
vendor_id : AuthenticAMD
cpu family : 15
model : 5
model name : AMD Opteron(tm) Processor 248
stepping : 10
cpu MHz : 2190.480
cache size : 1024 KB
fpu : yes
fpu_exception : yes
cpuid level : 1
flags : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr
pge mca cmov pat pse36 clflush mmx fxsr sse sse2 syscall nx mmxext lm
3dnowext 3dnow
bogomips : 4384.18
TLB size : 1024 4K pages
clflush size : 64
cache_alignment : 64
address sizes : 40 bits physical, 48 bits virtual
power management: ts fid vid ttp
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