[BioC] looking for Affy 500k snp chip data
Wittner, Ben, Ph.D.
Wittner.Ben at mgh.harvard.edu
Fri Mar 30 19:13:35 CEST 2007
There are 270 normal samples on the HapMap website, www.hapmap.org. -Ben
> -----Original Message-----
> From: bioconductor-bounces at stat.math.ethz.ch [mailto:bioconductor-
> bounces at stat.math.ethz.ch] On Behalf Of Mike Cariaso
> Sent: Friday, March 30, 2007 12:12 PM
> To: bioconductor at stat.math.ethz.ch
> Subject: [BioC] looking for Affy 500k snp chip data
>
> A bit off topic, but hopefully the right audience.
>
> I'm trying to get some test data from the Affy Mapping 500K Array Set
> https://www.affymetrix.com/support/technical/byproduct.affx?product=500k
>
> The only source I'm aware of is listed at
> http://arrayconsortium.tgen.org/np2/navigateRepository.do
>
> however the actual link to ftp://arrayconsortium.tgen.org/SNP/
> doesn't seem to work for me.
>
> Is anyone aware of a source of I could use for some preliminary in-house
> tool development?
> A handful of normal human samples would be ideal, but I'd be grateful for
> pointers to anything run on this platform.
>
>
> --
> Mike Cariaso * Bioinformatics Software * http://www.cariaso.com
>
>
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>
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