[BioC] LIMMA P-value calculations/Suggestions for flagged data

Sergio Barberan barberan at biology.ucsc.edu
Sat Mar 24 03:40:59 CET 2007


> I've argued on this mailing list and elsewhere for a long time that,
> rather than flagging faint
> spots, it's better to use a better background correction method that
> avoids a blow out of M-values
> at low intensities.

Is RMA such a good background correction method?

cheers,
sergio



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