[BioC] Failing to install genefilter-1.12.0

[Seth Falcon]

Benilton Carvalho <bcarvalh at jhsph.edu> writes:

> Hi Herve,
>
> thanks for your feedback.
>
> I do have libstdc++ and libstd++-devel (3.4.6-3) available... and c+ 
> +config.h is installed on my system.
>
> Any chance it is something else?

Well, I'd say it is very likely something else since this didn't solve
it for you ;-)

I can install genefilter just fine on an x86_64 system using R 2.4.1.
So I don't think it is a problem with the genefilter code.

The errors you get are strange in that they seem to suggest that files
in your system's c++ headers are not valid.

One thing to try would be to google for some of those error messages.
Perhaps there is something specific for your distribution and version?

What version of gcc do you have?  Can you build a hello world c++
program?  How about RBGL or affxparser?

+ seth

-- 
Seth Falcon | Computational Biology | Fred Hutchinson Cancer Research Center
http://bioconductor.org