[BioC] about gene annotation
yanju
yanju at liacs.nl
Mon Jan 22 18:15:39 CET 2007
Hello all,
I was tring to annotate zelbrafish microarray data using genbank
function, but I got the following errors. Could you tell me what the
problem is?
library(XML)
library(annotate)
genbank("AW116961")
Entity: line 47: parser error : Opening and ending tag mismatch: link
line 29 and head
</head>
^
Entity: line 67: parser error : EntityRef: expecting ';'
ryBox"
action="http://www.ncbi.nlm.nih.gov/entrez/utils/pmqty.fcgi?CMD=search&DB
........
........
*** caught segfault ***
address 0xc0000000, cause 'memory not mapped'
Segmentation fault
but if i show the result using browser like
genbank("AW116961",disp=c("browser")), it works fine.
what is the problem???
Thanks in advance
Regards,
Yanju
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