[BioC] Import GEO Soft format

[João Fadista]

Hi,

You can use the GEOquery package to import the data into R.

Kind regards,
João Fadista 

-----Original Message-----
From: bioconductor-bounces at stat.math.ethz.ch [mailto:bioconductor-bounces at stat.math.ethz.ch] On Behalf Of Daniel Brewer
Sent: Wednesday, January 03, 2007 11:55 AM
To: bioconductor at stat.math.ethz.ch
Subject: [BioC] Import GEO Soft format

Hi,

I have got some aCGH data from GEO, what is the best way to get this into R in a suitable object.  Is there a package that interprets Soft format or is the approach to produce tab-delimited files?

Thanks

--
**************************************************************

Daniel Brewer, Ph.D.

Institute of Cancer Research
Molecular Carcinogenesis
MUCRC
15 Cotswold Road
Sutton, Surrey SM2 5NG
United Kingdom

Tel: +44 (0) 20 8722 4109
Fax: +44 (0) 20 8722 4141

Email: daniel.brewer at icr.ac.uk

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