[BioC] http://mail.google.com/mail/?ik=c8b0ad881f&view=cm&fs=1&tf=1&to=Bioconductor%40stat.math.ethz.ch&zx=x780aw-ixfpz3TFBSand Biconductor

[Stephen Henderson]

I have precompiled data that maps CONFAC data to the transcripts on the
hgu133plus2 + moe430a chips to their TFBS (thanks to Carlos Moreno).
This is TFBS only within 5kb of promoters within mouse/human conserved
regions.

I have been intending for some time (with CONFACs permission) to package
this up and submit it to BioC. Is anyone else interested?


Stephen Henderson
Wolfson Inst. for Biomedical Research
Cruciform Bldg., Gower Street
University College London
United Kingdom, WC1E 6BT
+44 (0)207 679 6827


-----Original Message-----
From: bioconductor-bounces at stat.math.ethz.ch
[mailto:bioconductor-bounces at stat.math.ethz.ch] On Behalf Of Lakshmanan
Iyer
Sent: 08 November 2006 15:55
To: Bioconductor at stat.math.ethz.ch
Subject:
[BioC]http://mail.google.com/mail/?ik=c8b0ad881f&view=cm&fs=1&tf=1&to=Bi
oconductor%40stat.math.ethz.ch&zx=x780aw-ixfpz3TFBSand Biconductor

Hi Everyone
 I am doing a time series microarray expression analysis using
Bioconductor
and it would be great if I could do the promter analysis also from
within
Bioconductor.
 Has anyone worked with the TFBS BioPerl module to perfome promoter
analysis
on the promoters of clusters of genes?


-Thanks
-Lax
Research Assistant Professor of Neuroscience
Tufts University School of Medicine
Boston
MA 02111

	[[alternative HTML version deleted]]

_______________________________________________
Bioconductor mailing list
Bioconductor at stat.math.ethz.ch
https://stat.ethz.ch/mailman/listinfo/bioconductor
Search the archives:
http://news.gmane.org/gmane.science.biology.informatics.conductor

**********************************************************************
This email and any files transmitted with it are confidentia...{{dropped}}