[BioC] GCRMA-Background

Khan, Sohail khan at cshl.edu
Fri Mar 31 18:26:52 CEST 2006

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Hi,

Is there a way to access the "background" intensity used in the gcrma or rma algorithm of the affy package? For example, after running gcrma() can I get the background for all the chips in the exprSet?  Thanks for your advice.


Sohail Khan
Scientific Programmer
COLD SPRING HARBOR LABORATORY
Genome Research Center
500 Sunnyside Boulevard
Woodbury, NY 11797
(516)422-4076

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