[BioC] Fwd: Re: How to Change labels to a print-tip boxplot ?

Naomi Altman naomi at stat.psu.edu
Mon Mar 20 19:27:52 CET 2006


>To: "Giulio Di Giovanni" <perimessaggini at hotmail.com>
>From: Naomi Altman <naomi at stat.psu.edu>
>Subject: Re: [BioC] How to Change labels to a print-tip boxplot ?
>Cc:
>Bcc:
>X-Eudora-Signature: <work>
>Date: Mon, 20 Mar 2006 13:22:54 -0500
>
>boxplot(MAset$M[,j]~MAset$genes$Block,names=c("A","B","C"))
>
>will replace the default names by "A", "B" and "C".
>
>?boxplot
>
>gives the list of parameters that can be changed.
>
>--Naomi
>
>At 10:53 AM 3/20/2006, you wrote:
>
>>Hi guys, thanks to Jenny Drnevich I discovered how to create a boxplot of M
>>values by print-tip group using limma package only:
>>
>>boxplot(MAset$M[,j]~MAset$genes$Block)
>>
>>Now my problem is : how to replace the xlabels (I mean, not the X-axis
>>title) with my labels ? The default is obviously the Block number, and I
>>would like to replace it with my vector of labels (grlab, character), the
>>same length of the number of the boxes.
>>
>>Yes I know that is more an R question, and even a stupid one, but I tried in
>>several ways and I almost became crazy on that !!!
>>I tried with par() settings, axis(), adding "lab=", labels, tried to rename
>>the xdata (names, rownames, etc).
>>If someone could help me, it will be great !!!
>>
>>Thanks in advance,
>>
>>Giulio
>>
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>>Bioconductor at stat.math.ethz.ch
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>
>Naomi S. Altman                                814-865-3791 (voice)
>Associate Professor
>Dept. of Statistics                              814-863-7114 (fax)
>Penn State University                         814-865-1348 (Statistics)
>University Park, PA 16802-2111

Naomi S. Altman                                814-865-3791 (voice)
Associate Professor
Dept. of Statistics                              814-863-7114 (fax)
Penn State University                         814-865-1348 (Statistics)
University Park, PA 16802-2111



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