[BioC] Limma and time-course data

[Ben Bolstad]

In the lingo of that lab

eb$F.p.value

Note that some might say that the ranking of the genes is of more
importance than whether a particular p-value is below a certain
threshold.



On Fri, 2006-03-03 at 15:23 +0000, michael watson (IAH-C) wrote:
> Hi Guys
> 
> OK, so I have access to the F statistic, but the example at
> http://bioinf.wehi.edu.au/marray/jsm2005/lab5/lab5.html simply uses the
> F statistic to find the top 500 changing genes - somewhat arbitrary.  
> 
> Can I access p-values for these F statistics, so that I can look at
> genes where time is a significant factor at, say, p<=0.05?
> 
> Many thanks
> Mick