[BioC] problems with GO package data
Ting-Yuan Liu
tliu at fhcrc.org
Thu Jan 26 19:12:43 CET 2006
Hi Yu-An,
I think the error message is not written in English, right? Could you
translate it to English so that it will be more helpful.
I cannot reproduce the same error in my machine, and here is the result:
> GOLOCUSID2GO[["4121"]]
$"GO:0005975"
$"GO:0005975"$GOID
IEA
"GO:0005975"
$"GO:0005975"$Evidence
[1] "IEA"
$"GO:0005975"$Ontology
[1] "BP"
$"GO:0006487"
$"GO:0006487"$GOID
IEA
"GO:0006487"
$"GO:0006487"$Evidence
[1] "IEA"
$"GO:0006487"$Ontology
[1] "BP"
.... skip ...
Here is the result of my sessionInfo():
> sessionInfo()
R version 2.2.1, 2006-01-04, x86_64-unknown-linux-gnu
attached base packages:
[1] "methods" "stats" "graphics" "grDevices" "utils" "datasets"
[7] "base"
other attached packages:
GO
"1.10.0"
Could you also provide the sessionInfo() output for more information
please? Thanks.
Ting-Yuan
______________________________________
Ting-Yuan Liu
Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
Seattle, WA, USA
______________________________________
On Wed, 25 Jan 2006, Yu-An Dong wrote:
> Hello, I've installed BioC 1.7 (with R 2.2.0) without problem. The GO
> package was installed but I can't
> access the data:
>
> > GOLOCUSID2GO[["4121"]]
> Fehler: rekursive Standardargument Referenz
>
> And I get similar error messages with the other functions in the GO
> package. Any suggestions? Thanks!
>
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