[BioC] makePlatformDesign for 10k Array
Benilton Carvalho
bcarvalh at jhsph.edu
Mon Feb 27 18:17:01 CET 2006
Hi Tim,
sorry, this is not the perfect solution yet, but you can use the textCDF
flag in makePDpackage.
makePDpackage(..., textCDF=TRUE)
please, feel free to contact me directly if you need anything else.
b.
On Mon, 27 Feb 2006, Tim Strom wrote:
> I tried to apply makePDpackage (from the MakePlatformDesgin
> package) on the files of the Affymetrix 10k (Version 2.0) array.
>
> I got the following error message:
> Reading Mapping10K_Xba142.cdf
> Magic number is not 67. This is probably not a binary cdf file.
> Error in CDFintoRList(cdf) : Problem reading binary cdf file
> /home/tim/mydata/programming/copynumber/cdf-files/10k/Mapping10K_Xba142.cdf.
> Possibly corrupted or truncated?
>
> Indead Mapping10K_Xba142.cdf is not in binary format.
> Is there any solution?
>
>
> Thank you
> Tim
>
>
> --------------------------------------------------------------
>
> Tim M. Strom Tel: +49 89 3187 3296
> Institut fuer Humangenetik Fax: +49 89 3187 3297
> Ingolstaedter Landstr. 1
> 85764 Neuherberg
> Germany
>
> WWW: http://ihg.gsf.de
>
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