[BioC] problem with package version of rat2302 1.8.5
Ting-Yuan Liu (FHCRC)
tliu at fhcrc.org
Wed Sep 28 10:17:29 CEST 2005
Hi Mark,
The function "getPkgVers" will read the version information from a file
called "liblisting.Rda" in your library paths. The function
"sessionInfo" will find out which packages are loaded and then read the
version information from their DESCRIPTION files directly.
I think the information in your liblisting.Rda file is not up-to-dated
(for some reason) so that the results from these two functions are
different.
HTH,
Ting-Yuan
On Tue, 27 Sep 2005, Kimpel, Mark William wrote:
> I have installed the newest version of annotation package rat2302, ver
> 1.8.5 .
> I have encountered what appears to be a discrepancy between the external
> and internal package version information. The code that reproduces this
> is below.
>
> Am I looking at this wrong or is this an issue that can be addressed?
>
> Mark
>
> Mark W. Kimpel, M.D.
>
>
> > sessionInfo()
> R version 2.2.0, 2005-08-29, i386-pc-mingw32
>
> attached base packages:
> [1] "tools" "methods" "stats" "graphics" "grDevices" "utils"
>
> [7] "datasets" "base"
>
> other attached packages:
> affy reposTools Biobase rat2302
> "1.7.2" "1.6.2" "1.7.0" "1.8.5"
>
> > getPkgVers("rat2302")
> [[1]]
> [1] "1.8.4"
>
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