[BioC] Need Advice on Analyzing Split Arrays

[Gordon K Smyth]

> Date: Tue, 13 Sep 2005 16:27:30 -0500
> From: <yjzhang at uiuc.edu>
> Subject: [BioC] Need Advice on Analyzing Split Arrays
> To: bioconductor at stat.math.ethz.ch
>
> Dear Colleagues,
>
> cDNA oligos for maize are printed on two glass slides. I'd
> like to analyze the microarray data using Limma package but
> am not sure how to do it. Any advices/suggestions are
> welcome. Thank you.
>
> YJ Zhang

The obvious approach is to read all the A slides into an RGList, then normalize. Do the same with
the B slides.  Then rbind() the two MAList objects.

Gordon