[BioC] Cannot load bioconductor's packages installed
zhengqi04 at mails.gucas.ac.cn
Tue Oct 25 08:10:38 CEST 2005
Good day, everone,
I am a new user from China of Bioconductor and having some problems while using it at present. As I cannot find any related archives at FAQ documents of R and bioconductor, I have to turn to you for help.
Maybe I should give you some information about my systerm and hardware first. I managed to get R and 'bioconductor' successfully installed on my personal computer, which is purchased from IBM company and whose operating systerm is 'Mandrake Linux' version 10.1. The version of R installed is 2.1.1, and that of bioconductor is the also the latest (must be version 1.7 as I get it installed following the 'bioconductor installation' procedure. Wish these were helpful in solving my problems.
The biggest problem I have met is that I can not load the package "graph" that has already been installed. I downloaded it using "biocLite("graph") and the installation progress was certainly finished without errors or warnings, but it was werid that when I tried to load it by 'library("graph")', a mistake occurded and it died unexpectedly. The prompted messages is writed down below (with some words translated into English by myself due to my Chinese Version Operation Systerm):
error: assign("nullgraphID", getuuid()) :
cannot find the function"getuuid"
error: package'graph' writing and loading R failed
error: loading 'graph' package/namespace failed."
And these were all the packages I had loaded then:
 ".GlobalEnv" "package:ALL" "package:cMAP"
 "package:Ruuid" "package:cluster" "package:hgu133a"
 "package:KEGG" "package:annotate" "package:GO"
 "package:Biobase" "package:tools" "package:methods"
 "package:stats" "package:graphics" "package:grDevices"
 "package:utils" "package:datasets" "Autoloads"
 "package:base" "
This is the main problem I'd like to ask for help. Were there any obscurity in my description, please let me know and I will give extra information as much as possible.
Eager to receive your reply!
Anonymous from China
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