[BioC] AnnBuilder: use local gene2accession file

John Zhang jzhang at jimmy.harvard.edu
Wed Nov 23 17:57:07 CET 2005


>Always when I execute the ABpkgBuilder command, BioC try to download the 
>whole "gene2accession" file from ncbi server. I try to modify 
>"myScrUrls" and "myOtherSrc" but without success. Any suggestion?

You also need to set fromWeb = FALSE to use files locally. But make sure your 
local files have the same name as that used by Entrez Gene.


>
>Thanks a lot, Andrej
>
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Jianhua Zhang
Department of Medical Oncology
Dana-Farber Cancer Institute
44 Binney Street
Boston, MA 02115-6084



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