[BioC] GOstats/tkWidgets/gcrma conflict
mattia.pelizzola at unimib.it
Tue Nov 22 18:50:00 CET 2005
I need the libraries GOstats, tkWidgets and gcrma.
I'm not able to load them, independently from the order in a Windows 2000
professional system with R2.2 and the current Bioc1.7 packages.
I get a generic fatal error ("Rgui.exe caused an error and will be closed.."
sorry but this is a translation from the error message in italian..)
I can successfully loading them in pairs..
I also tried with Windows 2000, R2.1 and Bioc 1.6, and I have got the same
No problems on Suse 9.3, R2.1, BioC 1.7...
tkWidgets and gcrma are in the dependencies of a package X that I have
I really would not need them in the same moment, but they are obviously loaded
when loading the package X.
I unsuccessfully tried to detach them before loading GOstats (the last one
that I need):
.... some code that uses these two libraries....
#detach("package:gcrma") #gcrma depends on both matchprobes and affy packages
but that did not help.
Conversely if I load:
I get no errors..
I'm a bit confused, about libraries having or not namespace, but it seems to
me that 'detach(libY)' does not restore a clean workspace as before loading
do you have any hints on the reason of this error, or on the way to 'fully'
unload the a library (in this case gcrma)?
thanks in advance
P.zza della Scienza 4
20126 Milano (Italy)
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