[BioC] Looking for R script to categorize genes using GO terms

[fhong@salk.edu]

Thanks, Robert.
I made the functions myself using the handout from the short Course(this
June), it turns out to be pretty simple. So I would provide the R script
of doing this if somebody ask for.

Good day.
Fangxin

> Hi,
>   There is some documentation in the Using Data Packages, vignette,
>
> something like
>
>   library(annotate)
>   openVignette()
>
> select #5 for the pdf, the R source code is also available, through
> other means.
>
> Feedback etc on whether the vignette needs improvement should be sent
> along to the package maintainer,
>
>   best wishes,
>     Robert
>
>
> fhong at salk.edu wrote:
>> Hi Dear list,
>>
>> I am wondering whether someone has written some R script to categorize
>> genes into different Go categories (e.g., replication, cell wall,...)
>> according to gene AffyID? I am working on ATH1 array. Or any hint/ quick
>> way to do it?
>>
>> Thanks in advance
>> Fangxin
>>
>>
>> --------------------
>> Fangxin Hong  Ph.D.
>> Plant Biology Laboratory
>> The Salk Institute
>> 10010 N. Torrey Pines Rd.
>> La Jolla, CA 92037
>> E-mail: fhong at salk.edu
>> (Phone): 858-453-4100 ext 1105
>>
>> _______________________________________________
>> Bioconductor mailing list
>> Bioconductor at stat.math.ethz.ch
>> https://stat.ethz.ch/mailman/listinfo/bioconductor
>>
>
> --
> Robert Gentleman, PhD
> Program in Computational Biology
> Division of Public Health Sciences
> Fred Hutchinson Cancer Research Center
> 1100 Fairview Ave. N, M2-B876
> PO Box 19024
> Seattle, Washington 98109-1024
> 206-667-7700
> rgentlem at fhcrc.org
>
>


--------------------
Fangxin Hong  Ph.D.
Plant Biology Laboratory
The Salk Institute
10010 N. Torrey Pines Rd.
La Jolla, CA 92037
E-mail: fhong at salk.edu
(Phone): 858-453-4100 ext 1105