[BioC] Looking for R script to categorize genes using GO terms

Sean Davis sdavis2 at mail.nih.gov
Wed Nov 2 19:44:56 CET 2005


On 11/2/05 1:25 PM, "fhong at salk.edu" <fhong at salk.edu> wrote:

> Hi Dear list,
> 
> I am wondering whether someone has written some R script to categorize
> genes into different Go categories (e.g., replication, cell wall,...)
> according to gene AffyID? I am working on ATH1 array. Or any hint/ quick
> way to do it?
> 
> Thanks in advance
> Fangxin

Have you looked at the GOstats package and its vignettes?  That is the place
to start.  There is metadata for ATH1 available.

Sean



More information about the Bioconductor mailing list