[BioC] gcrma problem

Zhijin Wu zwu at jhsph.edu
Tue Mar 29 16:20:11 CEST 2005


You can see the content of function compute.affinities by 
>compute.affinities
#let cdfname be your chip type and 
cdfname=cdfName(Scoe.m600.exp)
verbose=TRUE
## then you can run the content of the function and see where the error
happens

On Mon, 28 Mar 2005, Wenqiong Chen wrote:

> Hi, list:
> I encountered the following problem when I was running gcrma:
> 
> > gcrma.m600<-gcrma(Scoe.m600.exp)
> Computing affinities.Error in compute.affinities(cdfName(object),
> verbose = verbose) : 
>         NAs are not allowed in subscripted assignments
> 
> How can I find out where the problem occurred?
> Thanks,
> wenqiong
> 
> 
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