[BioC] Error when running rma

Min-Han Tan minhan.science at gmail.com
Sat Mar 26 12:31:55 CET 2005


Good evening,

I am encountering problems running rma with a particular CEL file
(when included into a group of other CEL files). It does not appear
when operating on other CEL files independently.  All files are
hgu133plus2 chips. My setup: R 2.0.1 on Linux; latest version of affy
(not devel)

>abc<-ReadAffy()
>cc<-rma(abc)
Background correcting
Error in density (x, kernel = "epanechikov", n=2^14)
need at least 2 points to select a bandwidth automatically

Error also appears on justRMA. 

Would appreciate any pointers. 

Thanks!

Min-Han



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