[BioC] Incompatible phenoData object. Created a new one.
SALIL SHARMA
ssharma at jhmi.edu
Fri Mar 25 23:08:10 CET 2005
Hello group,
Iam a novice in microarray data analysis.
I am using R version 2 and Bioconductor version 1.5.
My experiment is to read some cel files from a directory and to derive expression values.
> library(Biobase)
> library(affy)
>library(hgu133a)
> data <- read.affybatch("lung.CEL","HEART.CEL","PROSTATE.CEL","UTERUS.CEL","LIVER.CEL")
Warning message:
Incompatible phenoData object. Created a new one.
in: read.affybatch("3AJW02021805_lung.CEL", "3AJZ02021909_HEART.CEL",
> dim(data)
NULL
I do not understand this problem. I have seen my friend using R version 1.9 has no problem with same files. Is this a bug in R 2.0 or am i committing a mistake here.
Could any one help me , please.
Thank you.
Salil
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