[BioC] error using humanLLMappingsACCNUM2LL

Denise Scholtens dscholtens at northwestern.edu
Fri Mar 4 18:08:35 CET 2005


Hello all,

I am trying to map a set of Genbank accession numbers to LocusLink IDs and 
get the following error using humanLLMappingsACCNUM2ALL:

 > get("AF426250",humanLLMappingsACCNUM2LL)
Error in get("AF426250", humanLLMappingsACCNUM2LL) :
         recursive default argument reference


I can map the other way from locuslink id to accession number, for example

 > get("219970",humanLLMappingsLL2ACCNUM)
  [1] "AF426250" "AW264415" "CN276025" "CV028891" "BF214297" "BF240961"
  [7] "BF328755" "AW755263" "BI761985" "BC016789" "BC021682" "NM"
[13] "BU676996" "CA311201"


Has anyone encountered this problem before?  Can you tell me how to deal 
with it?

Thanks for your help,
Denise



******************************************
Denise Scholtens, Ph.D.
Northwestern Medical School
Department of Preventive Medicine
Chicago, IL


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