[BioC] Generic Loess Normalization
huber at ebi.ac.uk
Fri Mar 4 17:03:33 CET 2005
for general local regression, you may also want to look at the locfit
package (on CRAN) which one might call a faster and more advanced
version of loess. It provides better diagnostic output and there is a
very nice textbook going with it.
James W. MacDonald wrote:
> Gene Cutler wrote:
>> Of the various Bioconductor methods, is there any which performs a
>> fairly generic loess normalization, leaving out fancy stuff like
>> print-tip normalization, etc?
>> I'd like to write some code based on this, so I'd like to see a
>> stripped-down example if there is one out there.
> You might look at loessFit in the limma package. Much of the heavy
> lifting appears to be done in C, however.
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