[BioC] turning cluster trees upside down

[Naomi Altman]

Thanks, Andy, but I don't think this is what I need.

I have never used grid, but the documentation says that it is used to add 
grid lines to a plot.  What I have is a cluster diagram which I want to 
flip.  I cannot simply use "flip" in a draw routine, because then the leaf 
labels will be upside down.

--Naomi


At 12:46 PM 3/3/2005, Liaw, Andy wrote:
>Others will know better.  Off the top of my head, I'd guess you can use grid
>to rotate just about anything.
>
>Andy
>
> > From: Naomi Altman
> >
> > My biologist colleague has asked if I could turn our cluster
> > plot upside
> > down, so that the leaves are at the top.
> >
> > I cannot see any simple way to do that - the options are
> > leaves at the
> > bottom or leaves at the right.  Is there some way to
> > re-orient the tree?
> >
> > I have already exported these data to PHYLIP, so if there is
> > a way to do it
> > in PHYLIP, that would also be useful information.
> >
> > Thanks,
> > Naomi
> >
> > Naomi S. Altman                                814-865-3791 (voice)
> > Associate Professor
> > Bioinformatics Consulting Center
> > Dept. of Statistics                              814-863-7114 (fax)
> > Penn State University                         814-865-1348
> > (Statistics)
> > University Park, PA 16802-2111
> >
> > _______________________________________________
> > Bioconductor mailing list
> > Bioconductor at stat.math.ethz.ch
> > https://stat.ethz.ch/mailman/listinfo/bioconductor
> >
> >
> >
>
>
>
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Naomi S. Altman                                814-865-3791 (voice)
Associate Professor
Bioinformatics Consulting Center
Dept. of Statistics                              814-863-7114 (fax)
Penn State University                         814-865-1348 (Statistics)
University Park, PA 16802-2111