[BioC] GO from hu35ksuba

Adaikalavan Ramasamy ramasamy at cancer.org.uk
Tue Jun 21 12:33:25 CEST 2005


Sorry if this question is documented somewhere but I could not find the
answer to it. Feel free to point this out to me ?

I am trying to get some gene ontology info from the chip Hu35KsubA for
which I think I need the package "hu35ksuba". Note that this is not the
same as "hu35ksubacdf" which is already provided by BioConductor.

1) Am I correct in thinking that I need "hu35ksuba" only ?

2) I do not think someone has built this for R. Can I download the CDF
file and then use make.cdf.env() to do this ? If anyone has this and is
willing to share, please send them to me offline and I would be very
grateful.

3) Where do I get the CDF file from ? I cannot see it on this site
http://www.affymetrix.com/support/technical/byproduct.affx?product=hu35k

Thank you.

Regards, Adai



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