[BioC] Geo GDS parser availability
Sean Davis
sdavis2 at mail.nih.gov
Wed Jul 27 20:32:09 CEST 2005
On Jul 27, 2005, at 2:25 PM, John Zhang wrote:
>
> >Does anyone know of a GEO (gene expression omnibus) GDS parser (R,
> >perl, or otherwise)?
>
> AnnBuilder has something that reads a file from GEO into R.
> >library(AnnBuilder)
> >geo <- GEO()
> >temp <- queryGEO(geo, "GPL49")
>
> Not sure if this is what you want.
Jianhua,
I was aware of this one, but actually, I am looking for one that reads
the GDS files, not GPL files.
Thanks,
Sean
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