[BioC] affymetrix RNA degradation

[James W. MacDonald]

Dr_Gyorffy_Balazs wrote:

> Hallo!
> 
> What is the sense of the RNA degradation plot in the affy
> package? How is a good and a bad plot looking?

Personally, I just expect the lines in the plot to be roughly parallel. 
AFAIK, the slope doesn't really mean anything.

> 
> Thank you.
> Balazs Györffy
> 
> 
> =====
> -------------------------
> Balazs Gyorffy MD, PhD
> Semmelweis University, 2nd Dept. of Internal Medicine
> Szentkiralyi u. 46, H-1088 Budapest, Hungary
> tel: 003612660926 / 5622
> fax: 003612660926 / 5596
> email: zsalab2 at yahoo.com
> 
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-- 
James W. MacDonald
Affymetrix and cDNA Microarray Core
University of Michigan Cancer Center
1500 E. Medical Center Drive
7410 CCGC
Ann Arbor MI 48109