[BioC] venn diagram

Laura Hollins LHollins at PICR.man.ac.uk
Tue Jan 18 10:22:41 CET 2005


Dear Katleen,

I have been doing this recently in, probably, quite a simplistic way
using 'intersect()' and 'setdiff()' to find the genes common to both
lists, or belonging to just one of the lists. This gave me the required
gene lists and I then made a venn diagram (for illustration) using
PowerPoint. 

Kind regards,

Laura

.......
Laura E Hollins
PhD Student 
Gene Therapy and Bioinformatics Groups 
Paterson Institute for Cancer Research 
email: LHollins at PICR.man.ac.uk



-----Original Message-----
From: bioconductor-bounces at stat.math.ethz.ch
[mailto:bioconductor-bounces at stat.math.ethz.ch] On Behalf Of Katleen De
Preter
Sent: 18 January 2005 09:12
To: bioconductor at stat.math.ethz.ch
Subject: [BioC] venn diagram

Dear colleagues,

Using Bioconductor-R, I would like to make venn diagrams based on two
lists of Affy-geneIDs (of different length). In fact I would like to
know which genes are present in both lists and which not.

Best regards,
Thank you in advance!!!
Katleen De Preter



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